Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CHAF1B | DONSON | ENSOANP00000015499 | ENSOANP00000003858 | Chromatin assembly factor 1 subunit B. | Downstream neighbor of SON. | 0.610 |
CHAF1B | F6TS55_ORNAN | ENSOANP00000015499 | ENSOANP00000015143 | Chromatin assembly factor 1 subunit B. | Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. | 0.479 |
CHAF1B | MCM2 | ENSOANP00000015499 | ENSOANP00000011401 | Chromatin assembly factor 1 subunit B. | DNA helicase; Belongs to the MCM family. | 0.459 |
CRYZL1 | DONSON | ENSOANP00000003860 | ENSOANP00000003858 | Crystallin zeta like 1. | Downstream neighbor of SON. | 0.689 |
DONSON | CHAF1B | ENSOANP00000003858 | ENSOANP00000015499 | Downstream neighbor of SON. | Chromatin assembly factor 1 subunit B. | 0.610 |
DONSON | CRYZL1 | ENSOANP00000003858 | ENSOANP00000003860 | Downstream neighbor of SON. | Crystallin zeta like 1. | 0.689 |
DONSON | F6TS55_ORNAN | ENSOANP00000003858 | ENSOANP00000015143 | Downstream neighbor of SON. | Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. | 0.794 |
DONSON | F6ZQJ6_ORNAN | ENSOANP00000003858 | ENSOANP00000003874 | Downstream neighbor of SON. | Uncharacterized protein. | 0.606 |
DONSON | F7AHP0_ORNAN | ENSOANP00000003858 | ENSOANP00000003852 | Downstream neighbor of SON. | ATP-grasp domain-containing protein. | 0.792 |
DONSON | FANCM | ENSOANP00000003858 | ENSOANP00000022071 | Downstream neighbor of SON. | Uncharacterized protein. | 0.579 |
DONSON | GART | ENSOANP00000003858 | ENSOANP00000003854 | Downstream neighbor of SON. | Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family. | 0.792 |
DONSON | MCM2 | ENSOANP00000003858 | ENSOANP00000011401 | Downstream neighbor of SON. | DNA helicase; Belongs to the MCM family. | 0.690 |
DONSON | POLD2 | ENSOANP00000003858 | ENSOANP00000010385 | Downstream neighbor of SON. | DNA polymerase delta 2, accessory subunit. | 0.759 |
DONSON | SON | ENSOANP00000003858 | ENSOANP00000028070 | Downstream neighbor of SON. | Uncharacterized protein. | 0.591 |
F6TS55_ORNAN | CHAF1B | ENSOANP00000015143 | ENSOANP00000015499 | Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. | Chromatin assembly factor 1 subunit B. | 0.479 |
F6TS55_ORNAN | DONSON | ENSOANP00000015143 | ENSOANP00000003858 | Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. | Downstream neighbor of SON. | 0.794 |
F6TS55_ORNAN | MCM2 | ENSOANP00000015143 | ENSOANP00000011401 | Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. | DNA helicase; Belongs to the MCM family. | 0.998 |
F6TS55_ORNAN | POLD2 | ENSOANP00000015143 | ENSOANP00000010385 | Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. | DNA polymerase delta 2, accessory subunit. | 0.799 |
F6ZQJ6_ORNAN | DONSON | ENSOANP00000003874 | ENSOANP00000003858 | Uncharacterized protein. | Downstream neighbor of SON. | 0.606 |
F6ZQJ6_ORNAN | F7AHP0_ORNAN | ENSOANP00000003874 | ENSOANP00000003852 | Uncharacterized protein. | ATP-grasp domain-containing protein. | 0.810 |
page 1 of 2