STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP20Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. (916 aa)    
Predicted Functional Partners:
ADRB1
Adrenoceptor beta 1.
    
 0.611
CCP110
Centriolar coiled-coil protein 110.
    
 0.599
YARS1
Tyrosine--tRNA ligase.
   
  
 0.557
LAP3
Leucine aminopeptidase 3.
    
 0.534
TRAF6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.481
F6XP74_ORNAN
Uncharacterized protein.
    
 0.479
WLS
Wnt ligand secretion mediator.
      
 0.471
F7G4U0_ORNAN
Uncharacterized protein.
    
 0.448
ENSOANP00000020067
annotation not available
    
 0.448
MRPL3
Mitochondrial ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.445
Your Current Organism:
Ornithorhynchus anatinus
NCBI taxonomy Id: 9258
Other names: O. anatinus, Platypus anatinus, duck-billed platypus, duckbill platypus, platypus
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