STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F7FLD0_ORNANDUF2451 domain-containing protein. (421 aa)    
Predicted Functional Partners:
VPS53
VPS53 subunit of GARP complex.
    
 
 0.953
VPS50
Vps54_N domain-containing protein.
 
     0.936
VPS54
VPS54 subunit of GARP complex.
   
 
 0.823
EIPR1
EARP complex and GARP complex interacting protein 1.
    
 
 0.807
CCDC186
Coiled-coil domain containing 186.
      
 0.534
GAK
Cyclin G associated kinase.
   
  
 0.519
F7CPC3_ORNAN
Uncharacterized protein.
   
  
 0.516
RBM26
RNA binding motif protein 26.
      
 0.502
F6YR21_ORNAN
Uncharacterized protein.
      
 0.499
STX6
Syntaxin 6; Belongs to the syntaxin family.
    
 
 0.442
Your Current Organism:
Ornithorhynchus anatinus
NCBI taxonomy Id: 9258
Other names: O. anatinus, Platypus anatinus, duck-billed platypus, duckbill platypus, platypus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.