STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RASGEF1ARasGEF domain family member 1A. (485 aa)    
Predicted Functional Partners:
RASA1
RAS p21 protein activator 1.
    
 
 0.671
RASGRP1
Ras-GEF domain-containing protein.
   
 0.555
CUX2
Homeobox protein cut-like.
   
  
 0.507
K7EBS2_ORNAN
Uncharacterized protein.
   
  
 0.504
RASGRP2
RAS guanyl releasing protein 2.
   
0.490
TIAM1
Uncharacterized protein.
   
  
 0.487
RIOK1
RIO kinase 1.
      
 0.456
SOS1
SOS Ras/Rac guanine nucleotide exchange factor 1.
   
0.453
NF1
Ras-GAP domain-containing protein.
      
 0.446
RAPGEF2
Rap guanine nucleotide exchange factor 2.
    
0.438
Your Current Organism:
Ornithorhynchus anatinus
NCBI taxonomy Id: 9258
Other names: O. anatinus, Platypus anatinus, duck-billed platypus, duckbill platypus, platypus
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