F6UC82_ORNAN protein (Ornithorhynchus anatinus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

F6UC82_ORNAN

BTB domain-containing protein. (599 aa)

Predicted Functional Partners:

CUL3

0.878

F7FAA9_ORNAN

0.798

RBX1

0.733

BBS1

0.622

BBS4

0.585

KBTBD8

0.579

BBS7

0.572

TTC8

0.565

F6SEP0_ORNAN

0.563

BBS9

0.552

Your Current Organism:

Ornithorhynchus anatinus

NCBI taxonomy Id: 9258
Other names: O. anatinus, Platypus anatinus, duck-billed platypus, duckbill platypus, platypus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BBS1	BBS4	ENSOANP00000011240	ENSOANP00000021791	BBS1 domain-containing protein.	Bardet-Biedl syndrome 4.	0.993
BBS1	BBS7	ENSOANP00000011240	ENSOANP00000023803	BBS1 domain-containing protein.	Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.	0.994
BBS1	BBS9	ENSOANP00000011240	ENSOANP00000006599	BBS1 domain-containing protein.	Uncharacterized protein.	0.979
BBS1	F6UC82_ORNAN	ENSOANP00000011240	ENSOANP00000005370	BBS1 domain-containing protein.	BTB domain-containing protein.	0.622
BBS1	TTC8	ENSOANP00000011240	ENSOANP00000017483	BBS1 domain-containing protein.	Tetratricopeptide repeat domain 8.	0.994
BBS4	BBS1	ENSOANP00000021791	ENSOANP00000011240	Bardet-Biedl syndrome 4.	BBS1 domain-containing protein.	0.993
BBS4	BBS7	ENSOANP00000021791	ENSOANP00000023803	Bardet-Biedl syndrome 4.	Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.	0.990
BBS4	BBS9	ENSOANP00000021791	ENSOANP00000006599	Bardet-Biedl syndrome 4.	Uncharacterized protein.	0.968
BBS4	F6UC82_ORNAN	ENSOANP00000021791	ENSOANP00000005370	Bardet-Biedl syndrome 4.	BTB domain-containing protein.	0.585
BBS4	TTC8	ENSOANP00000021791	ENSOANP00000017483	Bardet-Biedl syndrome 4.	Tetratricopeptide repeat domain 8.	0.991
BBS7	BBS1	ENSOANP00000023803	ENSOANP00000011240	Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.	BBS1 domain-containing protein.	0.994
BBS7	BBS4	ENSOANP00000023803	ENSOANP00000021791	Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.	Bardet-Biedl syndrome 4.	0.990
BBS7	BBS9	ENSOANP00000023803	ENSOANP00000006599	Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.	Uncharacterized protein.	0.965
BBS7	F6UC82_ORNAN	ENSOANP00000023803	ENSOANP00000005370	Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.	BTB domain-containing protein.	0.572
BBS7	TTC8	ENSOANP00000023803	ENSOANP00000017483	Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.	Tetratricopeptide repeat domain 8.	0.992
BBS9	BBS1	ENSOANP00000006599	ENSOANP00000011240	Uncharacterized protein.	BBS1 domain-containing protein.	0.979
BBS9	BBS4	ENSOANP00000006599	ENSOANP00000021791	Uncharacterized protein.	Bardet-Biedl syndrome 4.	0.968
BBS9	BBS7	ENSOANP00000006599	ENSOANP00000023803	Uncharacterized protein.	Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.	0.965
BBS9	F6UC82_ORNAN	ENSOANP00000006599	ENSOANP00000005370	Uncharacterized protein.	BTB domain-containing protein.	0.552
BBS9	TTC8	ENSOANP00000006599	ENSOANP00000017483	Uncharacterized protein.	Tetratricopeptide repeat domain 8.	0.980