STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBX1Chromobox 1. (185 aa)    
Predicted Functional Partners:
SUV39H2
Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.
   
0.916
F7DXJ9_ORNAN
B box-type domain-containing protein.
    
 0.879
F7CX73_ORNAN
Uncharacterized protein.
    
 
 0.872
F6R670_ORNAN
RING-type domain-containing protein.
    
 0.851
RNF2
Ring finger protein 2.
    
 0.791
BMI1
RING-type domain-containing protein.
   
 0.787
F6TP73_ORNAN
Uncharacterized protein.
    
 0.780
E2F6
E2F transcription factor 6.
   
 0.767
CBX3
Chromobox 3.
  
 
0.766
PCGF1
Uncharacterized protein.
   
 0.740
Your Current Organism:
Ornithorhynchus anatinus
NCBI taxonomy Id: 9258
Other names: O. anatinus, Platypus anatinus, duck-billed platypus, duckbill platypus, platypus
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.