STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SGCESarcoglycan epsilon. (369 aa)    
Predicted Functional Partners:
DAG1
Dystroglycan 1.
    
 0.753
F7C7E2_ORNAN
Uncharacterized protein.
   
 0.714
SNTA1
Uncharacterized protein.
    
 0.689
SNTB2
Syntrophin beta 2.
    
 0.680
SNTG1
Syntrophin gamma 1.
   
 
 0.678
SNTG2
Syntrophin gamma 2.
   
 
 0.678
SGCD
Uncharacterized protein.
   
 
 0.649
MEST
Mesoderm specific transcript.
      
 0.635
SSPN
Uncharacterized protein.
   
  
 0.621
SGCB
Sarcoglycan beta.
     
 0.592
Your Current Organism:
Ornithorhynchus anatinus
NCBI taxonomy Id: 9258
Other names: O. anatinus, Platypus anatinus, duck-billed platypus, duckbill platypus, platypus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.