STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC40Uncharacterized protein. (1142 aa)    
Predicted Functional Partners:
RSPH4A
Uncharacterized protein.
   
 
 0.805
CCDC63
Coiled-coil domain containing 63.
   
  
 0.733
SPEF2
Uncharacterized protein.
    
 0.724
DRC3
Dynein regulatory complex subunit 3.
   
 
 0.689
F6UIP3_ORNAN
Uncharacterized protein.
   
 
 0.682
SEMA7A
Uncharacterized protein; Belongs to the semaphorin family.
      
 0.669
DNALI1
Dynein axonemal light intermediate chain 1.
   
 
 0.658
AK7
Uncharacterized protein.
   
 
 0.625
ARMC4
Armadillo repeat containing 4.
    
 
 0.618
TTC29
Tetratricopeptide repeat domain 29.
   
 
 0.610
Your Current Organism:
Ornithorhynchus anatinus
NCBI taxonomy Id: 9258
Other names: O. anatinus, Platypus anatinus, duck-billed platypus, duckbill platypus, platypus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.