STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RIMS1C2 domain-containing protein. (153 aa)    
Predicted Functional Partners:
RAB3A
RAB3A, member RAS oncogene family.
    
 0.944
F6TWL4_ORNAN
PDZ domain-containing protein.
 
  
 
 0.908
K7E719_ORNAN
RabBD domain-containing protein.
 
  
 
 0.908
F7DCC4_ORNAN
Uncharacterized protein.
 
      0.900
K7EDK8_ORNAN
RabBD domain-containing protein.
 
      0.898
GABRR1
Gamma-aminobutyric acid type A receptor rho1 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
  
 0.593
SNAP25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 
 0.586
CASK
Uncharacterized protein; Belongs to the MAGUK family.
   
 0.562
K7E7D5_ORNAN
Guanylate kinase-like domain-containing protein.
   
 0.562
K7EC01_ORNAN
Protein kinase domain-containing protein.
   
 0.559
Your Current Organism:
Ornithorhynchus anatinus
NCBI taxonomy Id: 9258
Other names: O. anatinus, Platypus anatinus, duck-billed platypus, duckbill platypus, platypus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.