STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DEPDC1DEP domain containing 1. (783 aa)    
Predicted Functional Partners:
RPE65
Retinoid isomerohydrolase RPE65.
 
      0.575
CCNB1
Cyclin B1; Belongs to the cyclin family.
   
  
 0.523
CCNB2
Cyclin B2; Belongs to the cyclin family.
   
  
 0.523
TTK
TTK protein kinase.
   
  
 0.473
CENPF
Centromere protein F.
   
  
 0.455
F7B1A6_ORNAN
Uncharacterized protein.
   
  
 0.440
PBK
PDZ binding kinase.
   
 
 0.436
F7B6F9_ORNAN
Uncharacterized protein.
   
 
 0.428
F6VNQ1_ORNAN
Rho-GAP domain-containing protein.
   
 
 0.428
ALDH18A1
Uncharacterized protein.
      
 0.416
Your Current Organism:
Ornithorhynchus anatinus
NCBI taxonomy Id: 9258
Other names: O. anatinus, Platypus anatinus, duck-billed platypus, duckbill platypus, platypus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.