STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GFOD1Glucose-fructose oxidoreductase domain containing 1. (287 aa)    
Predicted Functional Partners:
ARHGAP42
Rho GTPase activating protein 42.
      
 0.714
TGDS
TDP-glucose 4,6-dehydratase.
  
 
 0.674
F6VII9_ORNAN
SGL domain-containing protein.
  
 
 0.629
F6VIE4_ORNAN
SGL domain-containing protein.
  
 
 0.629
KARS1
Lysine--tRNA ligase.
  
    0.623
GALK1
Galactokinase 1.
  
 
 0.502
GALK2
Uncharacterized protein.
  
 
 0.502
K7EAS1_ORNAN
Uncharacterized protein.
  
 
 0.502
GPI
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.495
BCKDHB
Branched chain keto acid dehydrogenase E1 subunit beta.
  
 
 0.490
Your Current Organism:
Ornithorhynchus anatinus
NCBI taxonomy Id: 9258
Other names: O. anatinus, Platypus anatinus, duck-billed platypus, duckbill platypus, platypus
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.