STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RHOT1Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family. (665 aa)    
Predicted Functional Partners:
WDR90
WD repeat domain 90.
 
 
 0.789
F7EBA6_ORNAN
SH3 domain-containing protein.
    
 0.776
ITSN2
Uncharacterized protein.
    
 0.776
F7EZK2_ORNAN
Uncharacterized protein.
    
 0.776
K7ED59_ORNAN
Uncharacterized protein.
    
 0.776
F7G604_ORNAN
Uncharacterized protein.
    
 0.666
ITSN1
Intersectin 1.
    
 0.651
TOMM20
Translocase of outer mitochondrial membrane 20.
   
 0.636
F6S9T2_ORNAN
Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.605
FKTN
Fukutin.
    
 0.597
Your Current Organism:
Ornithorhynchus anatinus
NCBI taxonomy Id: 9258
Other names: O. anatinus, Platypus anatinus, duck-billed platypus, duckbill platypus, platypus
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.