STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6QIA6_ORNANGMC_OxRdtase_N domain-containing protein; Belongs to the GMC oxidoreductase family. (325 aa)    
Predicted Functional Partners:
CHDH
GMC_oxred_C domain-containing protein.
 
     0.951
TTC30B
TPR_REGION domain-containing protein.
    
 0.896
IFT88
Intraflagellar transport 88.
    
 0.881
IFT57
Intraflagellar transport 57.
    
 0.880
IFT172
Intraflagellar transport 172.
    
 0.874
CLUAP1
Clusterin associated protein 1.
    
 0.862
TRAF3IP1
TRAF3 interacting protein 1.
    
 0.857
IFT52
ABC_transp_aux domain-containing protein.
    
 0.826
F7CKM4_ORNAN
Uncharacterized protein.
    
 0.826
TTC26
Tetratricopeptide repeat domain 26.
    
 0.814
Your Current Organism:
Ornithorhynchus anatinus
NCBI taxonomy Id: 9258
Other names: O. anatinus, Platypus anatinus, duck-billed platypus, duckbill platypus, platypus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.