STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6QH21_ORNANUncharacterized protein. (341 aa)    
Predicted Functional Partners:
VPS26A
VPS26, retromer complex component A.
   
 0.977
VPS29
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
   
 0.967
SNX3
Sorting nexin 3.
   
 0.956
VPS35
Uncharacterized protein.
 
     0.950
SNX2
Sorting nexin 2.
   
 
 0.852
F7GCF7_ORNAN
Vps5 domain-containing protein.
   
 
 0.852
SNX10
Sorting nexin 10.
   
 0.829
SNX11
Sorting nexin 11.
   
 0.829
GAK
Cyclin G associated kinase.
   
 
 0.777
WLS
Wnt ligand secretion mediator.
    
 0.725
Your Current Organism:
Ornithorhynchus anatinus
NCBI taxonomy Id: 9258
Other names: O. anatinus, Platypus anatinus, duck-billed platypus, duckbill platypus, platypus
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