STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F7BRJ4_ORNANL-lactate dehydrogenase; Belongs to the LDH/MDH superfamily. (385 aa)    
Predicted Functional Partners:
PC
CbamoylP_synth_lsu-like_ATP-bd domain-containing protein.
  
 0.958
GOT2
Aspartate aminotransferase.
   
 0.953
GOT1
Aspartate aminotransferase.
   
 0.952
PKM
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.949
PKLR
PK domain-containing protein.
  
 0.949
LDHB
Uncharacterized protein.
     
0.947
GOT1L1
Aminotran_1_2 domain-containing protein.
   
 0.941
ME1
Malic enzyme.
  
 0.936
ME2
Malic enzyme.
  
 0.936
BCKDHB
Branched chain keto acid dehydrogenase E1 subunit beta.
  
 0.926
Your Current Organism:
Ornithorhynchus anatinus
NCBI taxonomy Id: 9258
Other names: O. anatinus, Platypus anatinus, duck-billed platypus, duckbill platypus, platypus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.