STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNISRPNN interacting serine and arginine rich protein. (733 aa)    
Predicted Functional Partners:
LUC7L3
LUC7 like 3 pre-mRNA splicing factor.
   
  
 0.961
PNN
Pinin, desmosome associated protein.
   
 
 0.909
SRSF11
Serine and arginine rich splicing factor 11.
   
 
 0.878
SREK1
Splicing regulatory glutamic acid and lysine rich protein 1.
   
 
 0.826
TTC14
Tetratricopeptide repeat domain 14.
   
   0.740
PRPF39
Uncharacterized protein.
   
  
 0.695
F6QP50_ORNAN
Uncharacterized protein.
   
  
 0.695
F7EQ97_ORNAN
Uncharacterized protein.
   
   0.688
F7EWA6_ORNAN
Uncharacterized protein.
   
  0.652
NKTR
PPIase cyclophilin-type domain-containing protein.
   
  0.652
Your Current Organism:
Ornithorhynchus anatinus
NCBI taxonomy Id: 9258
Other names: O. anatinus, Platypus anatinus, duck-billed platypus, duckbill platypus, platypus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.