STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC1ASMC_N domain-containing protein. (397 aa)    
Predicted Functional Partners:
ESPL1
Peptidase C50 domain-containing protein.
   
 0.962
SMC3
SMC hinge domain-containing protein.
   
0.961
RAD21
Uncharacterized protein.
   
 0.950
F7G6X2_ORNAN
SMC hinge domain-containing protein.
 
     0.943
STAG2
Stromal antigen 2.
   
 0.927
STAG1
SCD domain-containing protein.
   
 0.927
F7DIW4_ORNAN
SCD domain-containing protein.
   
 0.927
SMC1B
Structural maintenance of chromosomes protein.
  
  
 
0.902
K7EFB0_ORNAN
Uncharacterized protein.
 
      0.900
ENSOANP00000028679
annotation not available
   
 0.817
Your Current Organism:
Ornithorhynchus anatinus
NCBI taxonomy Id: 9258
Other names: O. anatinus, Platypus anatinus, duck-billed platypus, duckbill platypus, platypus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.