Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
F7F7A8_ORNAN | LSM4 | ENSOANP00000014928 | ENSOANP00000011839 | Nop domain-containing protein. | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.985 |
F7F7A8_ORNAN | LSM8 | ENSOANP00000014928 | ENSOANP00000022902 | Nop domain-containing protein. | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.990 |
F7F7A8_ORNAN | MFAP1 | ENSOANP00000014928 | ENSOANP00000029200 | Nop domain-containing protein. | Uncharacterized protein. | 0.987 |
F7F7A8_ORNAN | PPIH | ENSOANP00000014928 | ENSOANP00000024112 | Nop domain-containing protein. | Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.990 |
F7F7A8_ORNAN | PRPF3 | ENSOANP00000014928 | ENSOANP00000024295 | Nop domain-containing protein. | Pre-mRNA processing factor 3. | 0.995 |
F7F7A8_ORNAN | PRPF4 | ENSOANP00000014928 | ENSOANP00000019303 | Nop domain-containing protein. | Pre-mRNA processing factor 4. | 0.997 |
F7F7A8_ORNAN | PRPF6 | ENSOANP00000014928 | ENSOANP00000007797 | Nop domain-containing protein. | Pre-mRNA processing factor 6. | 0.997 |
F7F7A8_ORNAN | PRPF8 | ENSOANP00000014928 | ENSOANP00000006752 | Nop domain-containing protein. | Pre-mRNA processing factor 8. | 0.995 |
F7F7A8_ORNAN | SNU13 | ENSOANP00000014928 | ENSOANP00000017949 | Nop domain-containing protein. | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | 0.998 |
F7F7A8_ORNAN | TXNL4A | ENSOANP00000014928 | ENSOANP00000020455 | Nop domain-containing protein. | Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. | 0.990 |
LSM4 | F7F7A8_ORNAN | ENSOANP00000011839 | ENSOANP00000014928 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Nop domain-containing protein. | 0.985 |
LSM4 | LSM8 | ENSOANP00000011839 | ENSOANP00000022902 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.996 |
LSM4 | MFAP1 | ENSOANP00000011839 | ENSOANP00000029200 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Uncharacterized protein. | 0.606 |
LSM4 | PPIH | ENSOANP00000011839 | ENSOANP00000024112 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.891 |
LSM4 | PRPF3 | ENSOANP00000011839 | ENSOANP00000024295 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Pre-mRNA processing factor 3. | 0.979 |
LSM4 | PRPF4 | ENSOANP00000011839 | ENSOANP00000019303 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Pre-mRNA processing factor 4. | 0.981 |
LSM4 | PRPF6 | ENSOANP00000011839 | ENSOANP00000007797 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Pre-mRNA processing factor 6. | 0.970 |
LSM4 | PRPF8 | ENSOANP00000011839 | ENSOANP00000006752 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Pre-mRNA processing factor 8. | 0.967 |
LSM4 | SNU13 | ENSOANP00000011839 | ENSOANP00000017949 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | 0.956 |
LSM4 | TXNL4A | ENSOANP00000011839 | ENSOANP00000020455 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. | 0.942 |
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