STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGPEP1Pyroglutamyl-peptidase I. (210 aa)    
Predicted Functional Partners:
PREP
Prolyl endopeptidase.
      
 0.591
F6QAC6_ORNAN
Uncharacterized protein.
      
 0.587
BLMH
Bleomycin hydrolase; Belongs to the peptidase C1 family.
     
 0.577
F6ZXD1_ORNAN
Uncharacterized protein.
      
 0.548
F7ETA7_ORNAN
DHFR domain-containing protein.
      
 0.540
BRMS1L
BRMS1 like transcriptional repressor.
      
 0.534
PIN4
Peptidyl-prolyl cis-trans isomerase.
      
 0.523
TGDS
TDP-glucose 4,6-dehydratase.
      
 0.520
PARK7
Parkinsonism associated deglycase.
     
 0.476
DDX31
RNA helicase.
  
  
 0.444
Your Current Organism:
Ornithorhynchus anatinus
NCBI taxonomy Id: 9258
Other names: O. anatinus, Platypus anatinus, duck-billed platypus, duckbill platypus, platypus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.