STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMU1SMU1 DNA replication regulator and spliceosomal factor. (513 aa)    
Predicted Functional Partners:
IK
IK cytokine.
   
 0.996
MFAP1
Uncharacterized protein.
   
 0.969
ZMAT2
Zinc finger matrin-type 2.
    
 0.942
F6SY19_ORNAN
PRP38_assoc domain-containing protein.
   
 0.937
PRPF6
Pre-mRNA processing factor 6.
    
 0.919
GORASP1
GRASP55_65 domain-containing protein.
 
 
  
 0.892
PRPF8
Pre-mRNA processing factor 8.
    
 0.888
WBP4
WW domain binding protein 4.
    
 0.834
LSM4
U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
    
 0.830
F7F7A8_ORNAN
Nop domain-containing protein.
    
 0.828
Your Current Organism:
Ornithorhynchus anatinus
NCBI taxonomy Id: 9258
Other names: O. anatinus, Platypus anatinus, duck-billed platypus, duckbill platypus, platypus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.