STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMG20AHigh mobility group 20A. (347 aa)    
Predicted Functional Partners:
KDM1A
Lysine demethylase 1A.
   
 0.793
HMG20B
High mobility group 20B.
  
 
 
0.767
PHF21A
PHD finger protein 21A.
    
 0.715
F6YYI7_ORNAN
SANT domain-containing protein.
   
 0.677
F7E2P8_ORNAN
Uncharacterized protein.
   
 0.677
K7EB75_ORNAN
Uncharacterized protein.
   
 
 0.670
K7EH69_ORNAN
Uncharacterized protein.
    
 0.654
CHD8
Helicase ATP-binding domain-containing protein.
    
 0.632
H2AZ2
Histone H2A; Belongs to the histone H2A family.
   
 0.606
GATAD2A
GATA zinc finger domain containing 2A.
   
 0.599
Your Current Organism:
Ornithorhynchus anatinus
NCBI taxonomy Id: 9258
Other names: O. anatinus, Platypus anatinus, duck-billed platypus, duckbill platypus, platypus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.