Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARHGEF10 | NDRG1 | ENSOANP00000022282 | ENSOANP00000015945 | Rho guanine nucleotide exchange factor 10. | N-myc downstream regulated 1. | 0.489 |
ARHGEF10 | RAB3GAP1 | ENSOANP00000022282 | ENSOANP00000012700 | Rho guanine nucleotide exchange factor 10. | RAB3 GTPase activating protein catalytic subunit 1. | 0.593 |
LCP2 | NDRG1 | ENSOANP00000012426 | ENSOANP00000015945 | Lymphocyte cytosolic protein 2. | N-myc downstream regulated 1. | 0.500 |
MYCN | NDRG1 | ENSOANP00000020301 | ENSOANP00000015945 | MYCN proto-oncogene, bHLH transcription factor. | N-myc downstream regulated 1. | 0.610 |
MYCN | NDRG2 | ENSOANP00000020301 | ENSOANP00000002535 | MYCN proto-oncogene, bHLH transcription factor. | NDRG family member 2. | 0.568 |
MYCN | TP53 | ENSOANP00000020301 | ENSOANP00000018980 | MYCN proto-oncogene, bHLH transcription factor. | P53 domain-containing protein. | 0.635 |
NDRG1 | ARHGEF10 | ENSOANP00000015945 | ENSOANP00000022282 | N-myc downstream regulated 1. | Rho guanine nucleotide exchange factor 10. | 0.489 |
NDRG1 | LCP2 | ENSOANP00000015945 | ENSOANP00000012426 | N-myc downstream regulated 1. | Lymphocyte cytosolic protein 2. | 0.500 |
NDRG1 | MYCN | ENSOANP00000015945 | ENSOANP00000020301 | N-myc downstream regulated 1. | MYCN proto-oncogene, bHLH transcription factor. | 0.610 |
NDRG1 | NDRG2 | ENSOANP00000015945 | ENSOANP00000002535 | N-myc downstream regulated 1. | NDRG family member 2. | 0.493 |
NDRG1 | RAB3GAP1 | ENSOANP00000015945 | ENSOANP00000012700 | N-myc downstream regulated 1. | RAB3 GTPase activating protein catalytic subunit 1. | 0.478 |
NDRG1 | SGK1 | ENSOANP00000015945 | ENSOANP00000031417 | N-myc downstream regulated 1. | Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. | 0.410 |
NDRG1 | SGK3 | ENSOANP00000015945 | ENSOANP00000003668 | N-myc downstream regulated 1. | Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. | 0.571 |
NDRG1 | TP53 | ENSOANP00000015945 | ENSOANP00000018980 | N-myc downstream regulated 1. | P53 domain-containing protein. | 0.423 |
NDRG1 | TP63 | ENSOANP00000015945 | ENSOANP00000021753 | N-myc downstream regulated 1. | Tumor protein 63 (p63); Acts as a sequence specific DNA binding transcriptional activator or repressor. The isoforms contain a varying set of transactivation and auto-regulating transactivation inhibiting domains thus showing an isoform specific activity. May be required in conjunction with TP73/p73 for initiation of p53/TP53 dependent apoptosis in response to genotoxic insults and the presence of activated oncogenes. | 0.429 |
NDRG1 | VASH1 | ENSOANP00000015945 | ENSOANP00000016777 | N-myc downstream regulated 1. | Vasohibin 1. | 0.568 |
NDRG2 | MYCN | ENSOANP00000002535 | ENSOANP00000020301 | NDRG family member 2. | MYCN proto-oncogene, bHLH transcription factor. | 0.568 |
NDRG2 | NDRG1 | ENSOANP00000002535 | ENSOANP00000015945 | NDRG family member 2. | N-myc downstream regulated 1. | 0.493 |
RAB3GAP1 | ARHGEF10 | ENSOANP00000012700 | ENSOANP00000022282 | RAB3 GTPase activating protein catalytic subunit 1. | Rho guanine nucleotide exchange factor 10. | 0.593 |
RAB3GAP1 | NDRG1 | ENSOANP00000012700 | ENSOANP00000015945 | RAB3 GTPase activating protein catalytic subunit 1. | N-myc downstream regulated 1. | 0.478 |
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