STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6Y1Y6_ORNANUncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (291 aa)    
Predicted Functional Partners:
RBP2
Retinol binding protein 2; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
   
 0.566
RLBP1
CRAL-TRIO domain-containing protein.
   
 0.547
ASMTL
Acetylserotonin O-methyltransferase like.
  
 
 0.527
COQ3
Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family.
   
 0.447
FDX1
Ferredoxin 1.
   
 0.444
F7FX85_ORNAN
Uncharacterized protein.
   
 0.444
FDX2
Uncharacterized protein.
   
 0.444
AASDH
Aminoadipate-semialdehyde dehydrogenase.
  
 0.419
FAM13C
Family with sequence similarity 13 member C.
      
 0.408
CYB5R4
Cytochrome b5 reductase 4.
  
 0.403
Your Current Organism:
Ornithorhynchus anatinus
NCBI taxonomy Id: 9258
Other names: O. anatinus, Platypus anatinus, duck-billed platypus, duckbill platypus, platypus
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