STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
REEP5Receptor expression-enhancing protein. (293 aa)    
Predicted Functional Partners:
TPI1
Triosephosphate isomerase.
   
  
 0.517
RHBDD3
Rhomboid domain-containing protein.
      
 0.501
F6SJI9_ORNAN
Uncharacterized protein.
    
 
 0.499
RTN3
Reticulon.
    
 
 0.499
RTN4
Reticulon.
    
 
 0.499
RTN1
Reticulon.
    
 
 0.499
LNPK
Lunapark, ER junction formation factor.
    
 
 0.473
TMEM39B
Transmembrane protein 39B.
      
 0.424
Your Current Organism:
Ornithorhynchus anatinus
NCBI taxonomy Id: 9258
Other names: O. anatinus, Platypus anatinus, duck-billed platypus, duckbill platypus, platypus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.