FAR1 protein (Ornithorhynchus anatinus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

FAR1

Fatty acyl-CoA reductase; Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. (515 aa)

Predicted Functional Partners:

FAR2

0.901

AGPS

0.610

CASK

0.599

F6TBI3_ORNAN

0.582

FASN

0.582

K7EAD5_ORNAN

0.582

AASDH

0.565

PEX7

0.564

CENPB

0.560

FIG4

0.557

Your Current Organism:

Ornithorhynchus anatinus

NCBI taxonomy Id: 9258
Other names: O. anatinus, Platypus anatinus, duck-billed platypus, duckbill platypus, platypus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AASDH	F6TBI3_ORNAN	ENSOANP00000012479	ENSOANP00000016735	Aminoadipate-semialdehyde dehydrogenase.	PKS_ER domain-containing protein.	0.941
AASDH	FAR1	ENSOANP00000012479	ENSOANP00000019107	Aminoadipate-semialdehyde dehydrogenase.	Fatty acyl-CoA reductase; Catalyzes the reduction of fatty acyl-CoA to fatty alcohols.	0.565
AASDH	FAR2	ENSOANP00000012479	ENSOANP00000010501	Aminoadipate-semialdehyde dehydrogenase.	Fatty acyl-CoA reductase; Catalyzes the reduction of fatty acyl-CoA to fatty alcohols.	0.565
AASDH	FASN	ENSOANP00000012479	ENSOANP00000016736	Aminoadipate-semialdehyde dehydrogenase.	PKS_KS domain-containing protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	0.941
AASDH	K7EAD5_ORNAN	ENSOANP00000012479	ENSOANP00000030492	Aminoadipate-semialdehyde dehydrogenase.	Acyl_transf_1 domain-containing protein.	0.941
AGPS	FAR1	ENSOANP00000013745	ENSOANP00000019107	Alkylglycerone-phosphate synthase; Catalyzes the exchange of an acyl for a long-chain alkyl group and the formation of the ether bond in the biosynthesis of ether phospholipids; Belongs to the FAD-binding oxidoreductase/transferase type 4 family.	Fatty acyl-CoA reductase; Catalyzes the reduction of fatty acyl-CoA to fatty alcohols.	0.610
AGPS	FAR2	ENSOANP00000013745	ENSOANP00000010501	Alkylglycerone-phosphate synthase; Catalyzes the exchange of an acyl for a long-chain alkyl group and the formation of the ether bond in the biosynthesis of ether phospholipids; Belongs to the FAD-binding oxidoreductase/transferase type 4 family.	Fatty acyl-CoA reductase; Catalyzes the reduction of fatty acyl-CoA to fatty alcohols.	0.434
AGPS	PEX7	ENSOANP00000013745	ENSOANP00000018420	Alkylglycerone-phosphate synthase; Catalyzes the exchange of an acyl for a long-chain alkyl group and the formation of the ether bond in the biosynthesis of ether phospholipids; Belongs to the FAD-binding oxidoreductase/transferase type 4 family.	Peroxisomal biogenesis factor 7.	0.873
CASK	FAR1	ENSOANP00000017853	ENSOANP00000019107	Uncharacterized protein; Belongs to the MAGUK family.	Fatty acyl-CoA reductase; Catalyzes the reduction of fatty acyl-CoA to fatty alcohols.	0.599
CENPB	FAR1	ENSOANP00000003910	ENSOANP00000019107	Centromere protein B.	Fatty acyl-CoA reductase; Catalyzes the reduction of fatty acyl-CoA to fatty alcohols.	0.560
F6TBI3_ORNAN	AASDH	ENSOANP00000016735	ENSOANP00000012479	PKS_ER domain-containing protein.	Aminoadipate-semialdehyde dehydrogenase.	0.941
F6TBI3_ORNAN	FAR1	ENSOANP00000016735	ENSOANP00000019107	PKS_ER domain-containing protein.	Fatty acyl-CoA reductase; Catalyzes the reduction of fatty acyl-CoA to fatty alcohols.	0.582
F6TBI3_ORNAN	FAR2	ENSOANP00000016735	ENSOANP00000010501	PKS_ER domain-containing protein.	Fatty acyl-CoA reductase; Catalyzes the reduction of fatty acyl-CoA to fatty alcohols.	0.582
F6TBI3_ORNAN	FASN	ENSOANP00000016735	ENSOANP00000016736	PKS_ER domain-containing protein.	PKS_KS domain-containing protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	0.925
F6TBI3_ORNAN	K7EAD5_ORNAN	ENSOANP00000016735	ENSOANP00000030492	PKS_ER domain-containing protein.	Acyl_transf_1 domain-containing protein.	0.949
FAR1	AASDH	ENSOANP00000019107	ENSOANP00000012479	Fatty acyl-CoA reductase; Catalyzes the reduction of fatty acyl-CoA to fatty alcohols.	Aminoadipate-semialdehyde dehydrogenase.	0.565
FAR1	AGPS	ENSOANP00000019107	ENSOANP00000013745	Fatty acyl-CoA reductase; Catalyzes the reduction of fatty acyl-CoA to fatty alcohols.	Alkylglycerone-phosphate synthase; Catalyzes the exchange of an acyl for a long-chain alkyl group and the formation of the ether bond in the biosynthesis of ether phospholipids; Belongs to the FAD-binding oxidoreductase/transferase type 4 family.	0.610
FAR1	CASK	ENSOANP00000019107	ENSOANP00000017853	Fatty acyl-CoA reductase; Catalyzes the reduction of fatty acyl-CoA to fatty alcohols.	Uncharacterized protein; Belongs to the MAGUK family.	0.599
FAR1	CENPB	ENSOANP00000019107	ENSOANP00000003910	Fatty acyl-CoA reductase; Catalyzes the reduction of fatty acyl-CoA to fatty alcohols.	Centromere protein B.	0.560
FAR1	F6TBI3_ORNAN	ENSOANP00000019107	ENSOANP00000016735	Fatty acyl-CoA reductase; Catalyzes the reduction of fatty acyl-CoA to fatty alcohols.	PKS_ER domain-containing protein.	0.582