STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC38A7Solute carrier family 38 member 7. (439 aa)    
Predicted Functional Partners:
GAD2
Glutamate decarboxylase 2.
     
 0.598
SLC38A9
Solute carrier family 38 member 9.
      
 0.594
COPS7A
COP9 signalosome subunit 7A.
      
 0.587
PNPO
Pyridoxamine 5'-phosphate oxidase.
      
 0.587
YIPF3
Yip1 domain family member 3.
      
 0.554
LAMTOR1
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.
    
 0.527
CARHSP1
Calcium regulated heat stable protein 1.
   
  
 0.519
LAMTOR2
Robl_LC7 domain-containing protein.
    
 0.513
TYW5
JmjC domain-containing protein.
      
 0.499
ARL15
ADP ribosylation factor like GTPase 15.
     
 0.495
Your Current Organism:
Ornithorhynchus anatinus
NCBI taxonomy Id: 9258
Other names: O. anatinus, Platypus anatinus, duck-billed platypus, duckbill platypus, platypus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.