STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP40Ubiquitin specific peptidase 40; Belongs to the peptidase C19 family. (1257 aa)    
Predicted Functional Partners:
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.898
RPS27A
Ribosomal protein S27a.
   
 0.870
GMPS
Guanine monophosphate synthase.
   
 
 0.851
TP53
P53 domain-containing protein.
    
 0.843
UVSSA
Uncharacterized protein.
    
 0.821
F7G4U0_ORNAN
Uncharacterized protein.
   
 0.766
ENSOANP00000020067
annotation not available
   
 0.766
DNMT1
DNA methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
   
 
 0.668
K7EC38_ORNAN
DMAP-interaction domain-containing protein.
   
 
 0.668
TRIP12
Thyroid hormone receptor interactor 12.
   
 
 0.665
Your Current Organism:
Ornithorhynchus anatinus
NCBI taxonomy Id: 9258
Other names: O. anatinus, Platypus anatinus, duck-billed platypus, duckbill platypus, platypus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.