STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPEB1Uncharacterized protein. (523 aa)    
Predicted Functional Partners:
AURKA
Aurora kinase A; Belongs to the protein kinase superfamily.
   
 0.932
CCNB2
Cyclin B2; Belongs to the cyclin family.
   
 
 0.924
PLK1
Polo like kinase 1.
   
 0.923
CDK1
Cyclin dependent kinase 1; Belongs to the protein kinase superfamily.
    
 0.921
CPEB2
Uncharacterized protein.
   
0.920
CPEB3
Uncharacterized protein.
   
0.920
TENT2
Terminal nucleotidyltransferase 2.
   
 
 0.840
LSM14A
LSM14A mRNA processing body assembly factor.
   
 0.760
DDX6
DEAD-box helicase 6; Belongs to the DEAD box helicase family.
   
 
 0.707
SYMPK
DUF3453 domain-containing protein.
    
 
 0.670
Your Current Organism:
Ornithorhynchus anatinus
NCBI taxonomy Id: 9258
Other names: O. anatinus, Platypus anatinus, duck-billed platypus, duckbill platypus, platypus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.