STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PROM1Uncharacterized protein. (607 aa)    
Predicted Functional Partners:
TBX4
T-box transcription factor 4.
      
 0.729
TBL1X
Uncharacterized protein.
      
 0.728
CDHR1
CA domain-containing protein.
    
 
 0.680
F6SPM6_ORNAN
Uncharacterized protein.
      
 0.591
F6PQF3_ORNAN
Link domain-containing protein.
      
 0.566
ALDH1A1
Aldehyde dehydrogenase 1 family member A1; Belongs to the aldehyde dehydrogenase family.
      
 0.553
CTNNB1
Catenin beta 1.
    
 0.547
CERKL
Ceramide kinase like.
      
 0.515
RHO
Rhodopsin.
      
 0.514
ALDH3A1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
      
 0.509
Your Current Organism:
Ornithorhynchus anatinus
NCBI taxonomy Id: 9258
Other names: O. anatinus, Platypus anatinus, duck-billed platypus, duckbill platypus, platypus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.