STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCFD1Sec1 family domain containing 1; Belongs to the STXBP/unc-18/SEC1 family. (725 aa)    
Predicted Functional Partners:
F7B1P3_ORNAN
t-SNARE coiled-coil homology domain-containing protein.
    
 0.997
YKT6
YKT6 v-SNARE homolog; Belongs to the synaptobrevin family.
    
 0.996
GOSR1
Golgi SNAP receptor complex member 1.
    
 
 0.989
BET1L
Bet1 golgi vesicular membrane trafficking protein like.
   
 0.988
F6RW96_ORNAN
V-SNARE coiled-coil homology domain-containing protein.
   
 0.962
STX18
Syntaxin 18.
    
 
 0.961
NAPB
Uncharacterized protein.
    
 0.937
F6SEC1_ORNAN
Uncharacterized protein.
    
 0.937
USO1
USO1 vesicle transport factor.
   
 0.932
F7GAP0_ORNAN
Uncharacterized protein.
   
 0.905
Your Current Organism:
Ornithorhynchus anatinus
NCBI taxonomy Id: 9258
Other names: O. anatinus, Platypus anatinus, duck-billed platypus, duckbill platypus, platypus
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