STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBSNRabenosyn, RAB effector. (760 aa)    
Predicted Functional Partners:
RAB4A
Uncharacterized protein.
    
 0.988
F6UD39_ORNAN
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.988
EHD1
EH domain containing 1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
    
 0.974
RAB22A
RAB22A, member RAS oncogene family.
   
 0.899
RAB5A
RAB5A, member RAS oncogene family.
   
 0.845
RAB17
Uncharacterized protein.
   
 0.845
K7EBA2_ORNAN
Uncharacterized protein.
   
 0.845
K7EDL5_ORNAN
Uncharacterized protein.
   
 0.845
RAB4B
Uncharacterized protein.
    
 
 0.802
ZHX2
Zinc fingers and homeoboxes 2.
  
 0.798
Your Current Organism:
Ornithorhynchus anatinus
NCBI taxonomy Id: 9258
Other names: O. anatinus, Platypus anatinus, duck-billed platypus, duckbill platypus, platypus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.