STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6VM68_ORNANUncharacterized protein. (440 aa)    
Predicted Functional Partners:
HNRNPA2B1
Heterogeneous nuclear ribonucleoprotein A2/B1.
   
 0.895
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
 0.880
F7A9T7_ORNAN
Uncharacterized protein.
    
 
 0.787
HNRNPC
RRM domain-containing protein.
   
 0.782
HNRNPU
Heterogeneous nuclear ribonucleoprotein U.
   
 0.778
ILF3
Uncharacterized protein.
   
 
 0.759
HNRNPR
Heterogeneous nuclear ribonucleoprotein R.
   
 0.730
NEMF
Nuclear export mediator factor.
 
  
   0.726
SYNCRIP
Synaptotagmin binding cytoplasmic RNA interacting protein.
   
 0.703
EIF4A3
Eukaryotic translation initiation factor 4A3.
   
 0.700
Your Current Organism:
Ornithorhynchus anatinus
NCBI taxonomy Id: 9258
Other names: O. anatinus, Platypus anatinus, duck-billed platypus, duckbill platypus, platypus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.