STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IMP4IMP U3 small nucleolar ribonucleoprotein 4. (296 aa)    
Predicted Functional Partners:
WDR36
WD repeat domain 36.
   
 0.997
F6YWL4_ORNAN
Uncharacterized protein.
   
 0.996
TBL3
Transducin beta like 3.
   
 0.996
PWP2
Uncharacterized protein.
   
 0.996
WDR43
WD repeat domain 43.
   
  0.995
RRP9
Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein.
   
 
 0.994
UTP6
UTP6 small subunit processome component.
   
  0.993
AATF
Uncharacterized protein.
   
   0.992
RRP7A
Ribosomal RNA processing 7 homolog A.
   
 0.992
UTP14A
Uncharacterized protein.
   
 
 0.989
Your Current Organism:
Ornithorhynchus anatinus
NCBI taxonomy Id: 9258
Other names: O. anatinus, Platypus anatinus, duck-billed platypus, duckbill platypus, platypus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.