STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXC13Homeobox domain-containing protein. (85 aa)    
Predicted Functional Partners:
FOXN1
Fork-head domain-containing protein.
   
 
 0.629
LEF1
Lymphoid enhancer binding factor 1.
    
 
 0.583
BARX2
BARX homeobox 2.
    
 
 0.578
MSX2
Homeobox domain-containing protein.
  
  
0.551
PHOX2B
Uncharacterized protein.
   
  
 0.505
F6XAB3_ORNAN
USP8_interact domain-containing protein.
      
 0.497
DSG4
Desmoglein 4; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion.
      
 0.491
F7D1N6_ORNAN
Uncharacterized protein.
      
 0.479
FOXN4
Forkhead box N4.
   
 
 0.466
SPP1
Uncharacterized protein.
      
 0.444
Your Current Organism:
Ornithorhynchus anatinus
NCBI taxonomy Id: 9258
Other names: O. anatinus, Platypus anatinus, duck-billed platypus, duckbill platypus, platypus
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.