STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LTBP4Uncharacterized protein. (563 aa)    
Predicted Functional Partners:
CFP
Complement factor properdin.
 
 
 0.892
FBN3-2
EGF-like domain-containing protein.
 
 
 
 0.885
LTBP1
EGF-like domain-containing protein.
 
   
 0.806
F6QD90_ORNAN
Uncharacterized protein.
 
  
  0.774
F6QE10_ORNAN
Transforming growth factor beta; Belongs to the TGF-beta family.
   
 0.609
FBLN2
Uncharacterized protein.
 
 
 
 0.590
TGFB3
Transforming growth factor beta; Belongs to the TGF-beta family.
   
 0.584
TGFB2
TGFb_propeptide domain-containing protein.
   
 0.480
F6XNU4_ORNAN
TGFb_propeptide domain-containing protein.
   
 0.477
ITGB6
Integrin beta; Belongs to the integrin beta chain family.
    
 0.453
Your Current Organism:
Ornithorhynchus anatinus
NCBI taxonomy Id: 9258
Other names: O. anatinus, Platypus anatinus, duck-billed platypus, duckbill platypus, platypus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.