STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CATSPEREUncharacterized protein. (848 aa)    
Predicted Functional Partners:
CATSPERB
Uncharacterized protein.
  
 
 0.748
F7FS67_ORNAN
Uncharacterized protein.
  
 
 0.640
ANKS4B
Ankyrin repeat and sterile alpha motif domain containing 4B.
    
 0.569
F6PP90_ORNAN
Uncharacterized protein.
  
 
 
 0.534
IFT57
Intraflagellar transport 57.
    
 0.479
SUMF1
FGE-sulfatase domain-containing protein.
    
 0.476
IFT172
Intraflagellar transport 172.
    
 0.475
TRAF3IP1
TRAF3 interacting protein 1.
    
 0.463
CATSPERD
Uncharacterized protein.
  
 
 
0.460
CATSPER1
Ion_trans domain-containing protein.
    
 0.456
Your Current Organism:
Ornithorhynchus anatinus
NCBI taxonomy Id: 9258
Other names: O. anatinus, Platypus anatinus, duck-billed platypus, duckbill platypus, platypus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.