SLC26A4 protein (Ornithorhynchus anatinus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

SLC26A4

STAS domain-containing protein. (319 aa)

Predicted Functional Partners:

SLC26A6

0.955

F7G065_ORNAN

0.900

SLC26A3

0.899

SLC26A7

0.861

GJB2

0.542

OTOF

0.525

TMC1

0.499

DUOXA2

0.497

DUOX2

0.495

CYTB

0.457

Your Current Organism:

Ornithorhynchus anatinus

NCBI taxonomy Id: 9258
Other names: O. anatinus, Platypus anatinus, duck-billed platypus, duckbill platypus, platypus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CYTB	F7G065_ORNAN	ENSOANP00000024985	ENSOANP00000026893	Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain. The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c. Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis.	Sulfate_transp domain-containing protein.	0.457
CYTB	SLC26A3	ENSOANP00000024985	ENSOANP00000021221	Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain. The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c. Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis.	Sulfate_transp domain-containing protein.	0.457
CYTB	SLC26A4	ENSOANP00000024985	ENSOANP00000025854	Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain. The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c. Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis.	STAS domain-containing protein.	0.457
CYTB	SLC26A6	ENSOANP00000024985	ENSOANP00000029335	Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain. The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c. Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis.	Sulfate_transp domain-containing protein.	0.457
CYTB	SLC26A7	ENSOANP00000024985	ENSOANP00000023658	Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain. The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c. Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis.	Sulfate_transp domain-containing protein.	0.457
DUOX2	DUOXA2	ENSOANP00000017494	ENSOANP00000017496	Uncharacterized protein.	Dual oxidase maturation factor 2.	0.991
DUOX2	SLC26A4	ENSOANP00000017494	ENSOANP00000025854	Uncharacterized protein.	STAS domain-containing protein.	0.495
DUOXA2	DUOX2	ENSOANP00000017496	ENSOANP00000017494	Dual oxidase maturation factor 2.	Uncharacterized protein.	0.991
DUOXA2	F7G065_ORNAN	ENSOANP00000017496	ENSOANP00000026893	Dual oxidase maturation factor 2.	Sulfate_transp domain-containing protein.	0.532
DUOXA2	SLC26A4	ENSOANP00000017496	ENSOANP00000025854	Dual oxidase maturation factor 2.	STAS domain-containing protein.	0.497
F7G065_ORNAN	CYTB	ENSOANP00000026893	ENSOANP00000024985	Sulfate_transp domain-containing protein.	Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain. The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c. Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis.	0.457
F7G065_ORNAN	DUOXA2	ENSOANP00000026893	ENSOANP00000017496	Sulfate_transp domain-containing protein.	Dual oxidase maturation factor 2.	0.532
F7G065_ORNAN	GJB2	ENSOANP00000026893	ENSOANP00000014354	Sulfate_transp domain-containing protein.	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	0.594
F7G065_ORNAN	SLC26A4	ENSOANP00000026893	ENSOANP00000025854	Sulfate_transp domain-containing protein.	STAS domain-containing protein.	0.900
F7G065_ORNAN	TMC1	ENSOANP00000026893	ENSOANP00000020756	Sulfate_transp domain-containing protein.	Transmembrane channel-like protein.	0.425
GJB2	F7G065_ORNAN	ENSOANP00000014354	ENSOANP00000026893	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Sulfate_transp domain-containing protein.	0.594
GJB2	OTOF	ENSOANP00000014354	ENSOANP00000000829	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Otoferlin.	0.469
GJB2	SLC26A4	ENSOANP00000014354	ENSOANP00000025854	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	STAS domain-containing protein.	0.542
GJB2	TMC1	ENSOANP00000014354	ENSOANP00000020756	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Transmembrane channel-like protein.	0.562
OTOF	GJB2	ENSOANP00000000829	ENSOANP00000014354	Otoferlin.	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	0.469