F7F0T8_ORNAN protein (Ornithorhynchus anatinus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

F7F0T8_ORNAN

Uncharacterized protein. (285 aa)

Predicted Functional Partners:

SMARCB1

0.646

SMARCD3

0.642

F6PGF2_ORNAN

0.474

F6TH15_ORNAN

0.474

ACTL6A

0.469

F6ZRC9_ORNAN

0.469

K7EA53_ORNAN

0.469

SMARCC1

0.431

SMARCC2

0.431

K7E7J6_ORNAN

0.431

Your Current Organism:

Ornithorhynchus anatinus

NCBI taxonomy Id: 9258
Other names: O. anatinus, Platypus anatinus, duck-billed platypus, duckbill platypus, platypus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACTL6A	F6PGF2_ORNAN	ENSOANP00000003389	ENSOANP00000006925	Uncharacterized protein; Belongs to the actin family.	HMG box domain-containing protein.	0.861
ACTL6A	F6TH15_ORNAN	ENSOANP00000003389	ENSOANP00000017364	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein.	0.711
ACTL6A	F6ZRC9_ORNAN	ENSOANP00000003389	ENSOANP00000015833	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein; Belongs to the actin family.	0.558
ACTL6A	F7F0T8_ORNAN	ENSOANP00000003389	ENSOANP00000026501	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein.	0.469
ACTL6A	K7E7J6_ORNAN	ENSOANP00000003389	ENSOANP00000029503	Uncharacterized protein; Belongs to the actin family.	SWIRM-assoc_3 domain-containing protein.	0.689
ACTL6A	K7EA53_ORNAN	ENSOANP00000003389	ENSOANP00000030410	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein.	0.899
ACTL6A	SMARCB1	ENSOANP00000003389	ENSOANP00000019292	Uncharacterized protein; Belongs to the actin family.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1.	0.993
ACTL6A	SMARCC1	ENSOANP00000003389	ENSOANP00000014807	Uncharacterized protein; Belongs to the actin family.	SWIRM domain-containing protein.	0.969
ACTL6A	SMARCC2	ENSOANP00000003389	ENSOANP00000029296	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein.	0.967
ACTL6A	SMARCD3	ENSOANP00000003389	ENSOANP00000009875	Uncharacterized protein; Belongs to the actin family.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3.	0.934
F6PGF2_ORNAN	ACTL6A	ENSOANP00000006925	ENSOANP00000003389	HMG box domain-containing protein.	Uncharacterized protein; Belongs to the actin family.	0.861
F6PGF2_ORNAN	F6ZRC9_ORNAN	ENSOANP00000006925	ENSOANP00000015833	HMG box domain-containing protein.	Uncharacterized protein; Belongs to the actin family.	0.861
F6PGF2_ORNAN	F7F0T8_ORNAN	ENSOANP00000006925	ENSOANP00000026501	HMG box domain-containing protein.	Uncharacterized protein.	0.474
F6PGF2_ORNAN	K7E7J6_ORNAN	ENSOANP00000006925	ENSOANP00000029503	HMG box domain-containing protein.	SWIRM-assoc_3 domain-containing protein.	0.738
F6PGF2_ORNAN	K7EA53_ORNAN	ENSOANP00000006925	ENSOANP00000030410	HMG box domain-containing protein.	Uncharacterized protein.	0.654
F6PGF2_ORNAN	SMARCB1	ENSOANP00000006925	ENSOANP00000019292	HMG box domain-containing protein.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1.	0.979
F6PGF2_ORNAN	SMARCC1	ENSOANP00000006925	ENSOANP00000014807	HMG box domain-containing protein.	SWIRM domain-containing protein.	0.870
F6PGF2_ORNAN	SMARCC2	ENSOANP00000006925	ENSOANP00000029296	HMG box domain-containing protein.	Uncharacterized protein.	0.770
F6PGF2_ORNAN	SMARCD3	ENSOANP00000006925	ENSOANP00000009875	HMG box domain-containing protein.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3.	0.951
F6TH15_ORNAN	ACTL6A	ENSOANP00000017364	ENSOANP00000003389	Uncharacterized protein.	Uncharacterized protein; Belongs to the actin family.	0.711