F7G0Z5_ORNAN protein (Ornithorhynchus anatinus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

F7G0Z5_ORNAN

FCP1 homology domain-containing protein. (96 aa)

Predicted Functional Partners:

CTDSPL2

0.926

GTF2F1

0.821

F6QR80_ORNAN

0.731

POLR2G

0.697

POLR2D

0.679

SUPT5H

0.623

POLR1C

0.606

POLR2C

0.606

LPIN1

0.593

LPIN2

0.593

Your Current Organism:

Ornithorhynchus anatinus

NCBI taxonomy Id: 9258
Other names: O. anatinus, Platypus anatinus, duck-billed platypus, duckbill platypus, platypus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CTDSPL2	F6QR80_ORNAN	ENSOANP00000005912	ENSOANP00000023302	FCP1 homology domain-containing protein.	Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	0.731
CTDSPL2	F7G0Z5_ORNAN	ENSOANP00000005912	ENSOANP00000026672	FCP1 homology domain-containing protein.	FCP1 homology domain-containing protein.	0.926
CTDSPL2	GTF2F1	ENSOANP00000005912	ENSOANP00000009747	FCP1 homology domain-containing protein.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.821
CTDSPL2	LPIN1	ENSOANP00000005912	ENSOANP00000004256	FCP1 homology domain-containing protein.	Lipin 1.	0.593
CTDSPL2	LPIN2	ENSOANP00000005912	ENSOANP00000014193	FCP1 homology domain-containing protein.	Lipin 2.	0.593
CTDSPL2	POLR1C	ENSOANP00000005912	ENSOANP00000004820	FCP1 homology domain-containing protein.	RNA polymerase I and III subunit C.	0.606
CTDSPL2	POLR2C	ENSOANP00000005912	ENSOANP00000014851	FCP1 homology domain-containing protein.	RNA polymerase II subunit C.	0.606
CTDSPL2	POLR2D	ENSOANP00000005912	ENSOANP00000020878	FCP1 homology domain-containing protein.	RNA polymerase II subunit D.	0.679
CTDSPL2	POLR2G	ENSOANP00000005912	ENSOANP00000009249	FCP1 homology domain-containing protein.	RNA polymerase II subunit G.	0.697
CTDSPL2	SUPT5H	ENSOANP00000005912	ENSOANP00000012989	FCP1 homology domain-containing protein.	SPT5 homolog, DSIF elongation factor subunit.	0.623
F6QR80_ORNAN	CTDSPL2	ENSOANP00000023302	ENSOANP00000005912	Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	FCP1 homology domain-containing protein.	0.731
F6QR80_ORNAN	F7G0Z5_ORNAN	ENSOANP00000023302	ENSOANP00000026672	Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	FCP1 homology domain-containing protein.	0.731
F7G0Z5_ORNAN	CTDSPL2	ENSOANP00000026672	ENSOANP00000005912	FCP1 homology domain-containing protein.	FCP1 homology domain-containing protein.	0.926
F7G0Z5_ORNAN	F6QR80_ORNAN	ENSOANP00000026672	ENSOANP00000023302	FCP1 homology domain-containing protein.	Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	0.731
F7G0Z5_ORNAN	GTF2F1	ENSOANP00000026672	ENSOANP00000009747	FCP1 homology domain-containing protein.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.821
F7G0Z5_ORNAN	LPIN1	ENSOANP00000026672	ENSOANP00000004256	FCP1 homology domain-containing protein.	Lipin 1.	0.593
F7G0Z5_ORNAN	LPIN2	ENSOANP00000026672	ENSOANP00000014193	FCP1 homology domain-containing protein.	Lipin 2.	0.593
F7G0Z5_ORNAN	POLR1C	ENSOANP00000026672	ENSOANP00000004820	FCP1 homology domain-containing protein.	RNA polymerase I and III subunit C.	0.606
F7G0Z5_ORNAN	POLR2C	ENSOANP00000026672	ENSOANP00000014851	FCP1 homology domain-containing protein.	RNA polymerase II subunit C.	0.606
F7G0Z5_ORNAN	POLR2D	ENSOANP00000026672	ENSOANP00000020878	FCP1 homology domain-containing protein.	RNA polymerase II subunit D.	0.679