F7A728_ORNAN protein (Ornithorhynchus anatinus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

F7A728_ORNAN

Uncharacterized protein. (155 aa)

Predicted Functional Partners:

RALBP1

0.900

F7AGG6_ORNAN

0.682

F6ZYG7_ORNAN

0.682

GAK

0.626

REPS2

0.575

F6PV67_ORNAN

0.575

REPS1

0.575

CSDE1

0.562

F7FPT3_ORNAN

0.562

KRAS

0.562

Your Current Organism:

Ornithorhynchus anatinus

NCBI taxonomy Id: 9258
Other names: O. anatinus, Platypus anatinus, duck-billed platypus, duckbill platypus, platypus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CSDE1	F7A728_ORNAN	ENSOANP00000005313	ENSOANP00000028803	Cold shock domain containing E1.	Uncharacterized protein.	0.562
CSDE1	F7FPT3_ORNAN	ENSOANP00000005313	ENSOANP00000007166	Cold shock domain containing E1.	CSP domain-containing protein.	0.927
CSDE1	GAK	ENSOANP00000005313	ENSOANP00000018076	Cold shock domain containing E1.	Cyclin G associated kinase.	0.472
CSDE1	RALBP1	ENSOANP00000005313	ENSOANP00000033173	Cold shock domain containing E1.	Rho-GAP domain-containing protein.	0.562
F6PV67_ORNAN	F7A728_ORNAN	ENSOANP00000023318	ENSOANP00000028803	Uncharacterized protein.	Uncharacterized protein.	0.575
F6PV67_ORNAN	GAK	ENSOANP00000023318	ENSOANP00000018076	Uncharacterized protein.	Cyclin G associated kinase.	0.965
F6PV67_ORNAN	RALBP1	ENSOANP00000023318	ENSOANP00000033173	Uncharacterized protein.	Rho-GAP domain-containing protein.	0.663
F6PV67_ORNAN	REPS1	ENSOANP00000023318	ENSOANP00000025448	Uncharacterized protein.	Uncharacterized protein.	0.900
F6PV67_ORNAN	REPS2	ENSOANP00000023318	ENSOANP00000006146	Uncharacterized protein.	RALBP1 associated Eps domain containing 2.	0.481
F6ZYG7_ORNAN	F7A728_ORNAN	ENSOANP00000015007	ENSOANP00000028803	Uncharacterized protein.	Uncharacterized protein.	0.682
F6ZYG7_ORNAN	GAK	ENSOANP00000015007	ENSOANP00000018076	Uncharacterized protein.	Cyclin G associated kinase.	0.472
F6ZYG7_ORNAN	RALBP1	ENSOANP00000015007	ENSOANP00000033173	Uncharacterized protein.	Rho-GAP domain-containing protein.	0.795
F7A728_ORNAN	CSDE1	ENSOANP00000028803	ENSOANP00000005313	Uncharacterized protein.	Cold shock domain containing E1.	0.562
F7A728_ORNAN	F6PV67_ORNAN	ENSOANP00000028803	ENSOANP00000023318	Uncharacterized protein.	Uncharacterized protein.	0.575
F7A728_ORNAN	F6ZYG7_ORNAN	ENSOANP00000028803	ENSOANP00000015007	Uncharacterized protein.	Uncharacterized protein.	0.682
F7A728_ORNAN	F7AGG6_ORNAN	ENSOANP00000028803	ENSOANP00000008972	Uncharacterized protein.	Uncharacterized protein.	0.682
F7A728_ORNAN	F7FPT3_ORNAN	ENSOANP00000028803	ENSOANP00000007166	Uncharacterized protein.	CSP domain-containing protein.	0.562
F7A728_ORNAN	GAK	ENSOANP00000028803	ENSOANP00000018076	Uncharacterized protein.	Cyclin G associated kinase.	0.626
F7A728_ORNAN	KRAS	ENSOANP00000028803	ENSOANP00000015323	Uncharacterized protein.	KRAS proto-oncogene, GTPase.	0.562
F7A728_ORNAN	RALBP1	ENSOANP00000028803	ENSOANP00000033173	Uncharacterized protein.	Rho-GAP domain-containing protein.	0.900