STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCCD1Uncharacterized protein. (204 aa)    
Predicted Functional Partners:
KDM8
Lysine demethylase 8.
    
 
 0.706
F7BJN3_ORNAN
TPR_REGION domain-containing protein.
    
 0.550
F7D9M7_ORNAN
Ubiquitin-like domain-containing protein.
    
 0.450
ZFAND4
Uncharacterized protein.
    
 0.450
K7E857_ORNAN
Uncharacterized protein.
    
 0.450
RANBP2
Uncharacterized protein.
   
 0.413
F7C593_ORNAN
TPR_REGION domain-containing protein.
   
 0.413
K7EF97_ORNAN
Uncharacterized protein.
   
 0.413
CZIB
CXXC motif containing zinc binding protein.
      
 0.407
MT-ND4
NADH-ubiquinone oxidoreductase chain 4; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity).
    
 
 0.401
Your Current Organism:
Ornithorhynchus anatinus
NCBI taxonomy Id: 9258
Other names: O. anatinus, Platypus anatinus, duck-billed platypus, duckbill platypus, platypus
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