STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBR1Uncharacterized protein. (98 aa)    
Predicted Functional Partners:
PAX6
Paired box 6.
   
 0.720
SATB2
Uncharacterized protein.
   
  
 0.712
DLX2
Distal-less homeobox 2.
   
 
 0.702
FOXP2
Forkhead box P2.
    
 
 0.661
EMX2
Empty spiracles homeobox 2.
    
 0.639
FOXG1
Forkhead box G1.
   
 
 0.634
NEUROD6
Neurogenic differentiation factor.
   
  
 0.632
FEZF2
FEZ family zinc finger 2.
   
 
 0.610
CASP3
Caspase 3; Belongs to the peptidase C14A family.
    
 
 0.589
BCL11B
BAF chromatin remodeling complex subunit BCL11B.
    
 
 0.587
Your Current Organism:
Ornithorhynchus anatinus
NCBI taxonomy Id: 9258
Other names: O. anatinus, Platypus anatinus, duck-billed platypus, duckbill platypus, platypus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.