STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
K7E9I4_ORNANRBR-type E3 ubiquitin transferase. (308 aa)    
Predicted Functional Partners:
ANKIB1
RBR-type E3 ubiquitin transferase.
 
     0.944
K7E6V6_ORNAN
Uncharacterized protein.
 
     0.919
GATAD1
GATA zinc finger domain containing 1.
 
 
  
 0.732
UBE2L6
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.594
RNF216
Ring finger protein 216.
    
 0.560
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.523
RPS27A
Ribosomal protein S27a.
    
 0.520
TRIP12
Thyroid hormone receptor interactor 12.
   
 
 0.500
K7EE40_ORNAN
Uncharacterized protein.
   
 
 0.500
F6YZU4_ORNAN
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.487
Your Current Organism:
Ornithorhynchus anatinus
NCBI taxonomy Id: 9258
Other names: O. anatinus, Platypus anatinus, duck-billed platypus, duckbill platypus, platypus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.