STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRIPAP1Uncharacterized protein. (159 aa)    
Predicted Functional Partners:
K7EFH6_ORNAN
Uncharacterized protein.
 
     0.946
F7EZ22_ORNAN
Uncharacterized protein.
 
     0.923
CCZ1
Uncharacterized protein.
    
 0.857
RAB7A
RAB7A, member RAS oncogene family.
    
 0.669
F6STQ4_ORNAN
Uncharacterized protein.
    
 0.601
RAB9A
RAB9A, member RAS oncogene family.
    
 0.601
RAB9B
RAB9B, member RAS oncogene family.
    
 0.601
VPS41
Vacuolar protein sorting-associated protein 41 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport pathways; Belongs to the VPS41 family.
    
 
 0.584
K7EH11_ORNAN
Uncharacterized protein.
    
 
 0.584
RAB7B
RAB7B, member RAS oncogene family.
    
 0.576
Your Current Organism:
Ornithorhynchus anatinus
NCBI taxonomy Id: 9258
Other names: O. anatinus, Platypus anatinus, duck-billed platypus, duckbill platypus, platypus
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