CHM protein (Ornithorhynchus anatinus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

CHM

Uncharacterized protein. (106 aa)

Predicted Functional Partners:

RAB7A

0.878

RABGGTB

0.870

RABGGTA

0.768

K7E6F3_ORNAN

0.768

K7EDW8_ORNAN

0.768

PTAR1

0.752

RABGEF1

0.708

RAB42

0.658

RAB1A

0.649

RAB3GAP1

0.635

Your Current Organism:

Ornithorhynchus anatinus

NCBI taxonomy Id: 9258
Other names: O. anatinus, Platypus anatinus, duck-billed platypus, duckbill platypus, platypus

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CHM	K7E6F3_ORNAN	ENSOANP00000031384	ENSOANP00000029110	Uncharacterized protein.	Uncharacterized protein.	0.768
CHM	K7EDW8_ORNAN	ENSOANP00000031384	ENSOANP00000031725	Uncharacterized protein.	Uncharacterized protein.	0.768
CHM	PTAR1	ENSOANP00000031384	ENSOANP00000007977	Uncharacterized protein.	Protein prenyltransferase alpha subunit repeat containing 1.	0.752
CHM	RAB1A	ENSOANP00000031384	ENSOANP00000026640	Uncharacterized protein.	RAB1A, member RAS oncogene family.	0.649
CHM	RAB3GAP1	ENSOANP00000031384	ENSOANP00000012700	Uncharacterized protein.	RAB3 GTPase activating protein catalytic subunit 1.	0.635
CHM	RAB42	ENSOANP00000031384	ENSOANP00000003089	Uncharacterized protein.	Uncharacterized protein.	0.658
CHM	RAB7A	ENSOANP00000031384	ENSOANP00000002950	Uncharacterized protein.	RAB7A, member RAS oncogene family.	0.878
CHM	RABGEF1	ENSOANP00000031384	ENSOANP00000016038	Uncharacterized protein.	Uncharacterized protein.	0.708
CHM	RABGGTA	ENSOANP00000031384	ENSOANP00000027485	Uncharacterized protein.	RabGGT_insert domain-containing protein.	0.768
CHM	RABGGTB	ENSOANP00000031384	ENSOANP00000008968	Uncharacterized protein.	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.	0.870
K7E6F3_ORNAN	CHM	ENSOANP00000029110	ENSOANP00000031384	Uncharacterized protein.	Uncharacterized protein.	0.768
K7E6F3_ORNAN	K7EDW8_ORNAN	ENSOANP00000029110	ENSOANP00000031725	Uncharacterized protein.	Uncharacterized protein.	0.900
K7E6F3_ORNAN	RAB1A	ENSOANP00000029110	ENSOANP00000026640	Uncharacterized protein.	RAB1A, member RAS oncogene family.	0.587
K7E6F3_ORNAN	RAB42	ENSOANP00000029110	ENSOANP00000003089	Uncharacterized protein.	Uncharacterized protein.	0.602
K7E6F3_ORNAN	RABGGTA	ENSOANP00000029110	ENSOANP00000027485	Uncharacterized protein.	RabGGT_insert domain-containing protein.	0.932
K7E6F3_ORNAN	RABGGTB	ENSOANP00000029110	ENSOANP00000008968	Uncharacterized protein.	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.	0.926
K7EDW8_ORNAN	CHM	ENSOANP00000031725	ENSOANP00000031384	Uncharacterized protein.	Uncharacterized protein.	0.768
K7EDW8_ORNAN	K7E6F3_ORNAN	ENSOANP00000031725	ENSOANP00000029110	Uncharacterized protein.	Uncharacterized protein.	0.900
K7EDW8_ORNAN	RAB1A	ENSOANP00000031725	ENSOANP00000026640	Uncharacterized protein.	RAB1A, member RAS oncogene family.	0.587
K7EDW8_ORNAN	RAB42	ENSOANP00000031725	ENSOANP00000003089	Uncharacterized protein.	Uncharacterized protein.	0.602