STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIRREL1Uncharacterized protein. (205 aa)    
Predicted Functional Partners:
F6QNU9_ORNAN
Uncharacterized protein.
 
     0.916
NPHS1
Ig-like domain-containing protein.
   
 0.903
K7EBN2_ORNAN
Ig-like domain-containing protein.
 
    
 0.786
CD2AP
CD2 associated protein.
    
 0.615
NPHS2
NPHS2 stomatin family member, podocin.
    
 0.585
CAPN8
Calpain 8; Belongs to the peptidase C2 family.
     
 0.580
TJP1-2
PDZ domain-containing protein.
    
 0.557
TJP1
Tight junction protein 1; Belongs to the MAGUK family.
    
 0.557
REL
REL proto-oncogene, NF-kB subunit.
    
 0.552
NCK1
NCK adaptor protein 1.
    
 0.491
Your Current Organism:
Ornithorhynchus anatinus
NCBI taxonomy Id: 9258
Other names: O. anatinus, Platypus anatinus, duck-billed platypus, duckbill platypus, platypus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.