STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMF1Uncharacterized protein. (86 aa)    
Predicted Functional Partners:
NSL1
Uncharacterized protein.
    
 0.961
MIS12
MIS12 kinetochore complex component.
    
 0.935
SPC24
Uncharacterized protein.
   
 0.898
F6RNU3_ORNAN
Uncharacterized protein.
    
 0.871
NDC80
NDC80 kinetochore complex component.
    
 0.743
SPC25
SPC25 component of NDC80 kinetochore complex.
    
  0.715
BUB1
BUB1 mitotic checkpoint serine/threonine kinase.
   
 0.709
F6RG50_ORNAN
BUB1 N-terminal domain-containing protein.
   
 0.694
CDC20
Cell division cycle 20.
   
 
 0.636
KNL1
Knl1_RWD_C domain-containing protein.
    
 0.586
Your Current Organism:
Ornithorhynchus anatinus
NCBI taxonomy Id: 9258
Other names: O. anatinus, Platypus anatinus, duck-billed platypus, duckbill platypus, platypus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.