STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI84767.1NitT/TauT family transport system ATP-binding protein. (444 aa)    
Predicted Functional Partners:
SEI84798.1
NitT/TauT family transport system permease protein.
 
   
 0.960
SEJ94789.1
NitT/TauT family transport system permease protein.
 
   
 0.856
SEJ16988.1
NitT/TauT family transport system permease protein.
 
 
 0.802
SEK03240.1
NitT/TauT family transport system permease protein.
 
 0.780
SEK13839.1
NitT/TauT family transport system permease protein.
 
 
 0.765
SEJ20599.1
NitT/TauT family transport system permease protein.
 
 
 0.700
SEJ59878.1
Sulfonate transport system permease protein.
 
 0.697
SEJ00390.1
Taurine transport system permease protein.
 
 
 0.692
SEK07870.1
Taurine transport system permease protein.
 
 
 0.691
SEJ23411.1
NitT/TauT family transport system permease protein.
 
 
 0.689
Your Current Organism:
Paraburkholderia tropica
NCBI taxonomy Id: 92647
Other names: ATCC BAA-831, Burkholderia tropica, Burkholderia tropica Reis et al. 2004, DSM 15359, LMG 22274, LMG:22274, P. tropica, Paraburkholderia tropica (Reis et al. 2004) Sawana et al. 2015, strain Ppe8
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.