STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEJ03354.1Hypothetical protein. (1588 aa)    
Predicted Functional Partners:
SEI86582.1
Signal transduction histidine kinase.
 
 0.999
SEJ20322.1
Signal transduction histidine kinase.
 
0.999
SEJ21664.1
Response regulator receiver sensor signal transduction histidine kinase.
 
 0.999
SEJ21749.1
Multi-sensor hybrid histidine kinase.
 
0.999
SEJ21819.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
0.999
SEJ23726.1
Signal transduction histidine kinase.
 
0.999
SEJ59750.1
Signal transduction histidine kinase.
 
0.999
SEJ61710.1
Signal transduction histidine kinase.
 
0.999
SEJ61731.1
Signal transduction histidine kinase.
 
0.999
SEJ83243.1
PAS/PAC sensor hybrid histidine kinase.
 
0.999
Your Current Organism:
Paraburkholderia tropica
NCBI taxonomy Id: 92647
Other names: ATCC BAA-831, Burkholderia tropica, Burkholderia tropica Reis et al. 2004, DSM 15359, LMG 22274, LMG:22274, P. tropica, Paraburkholderia tropica (Reis et al. 2004) Sawana et al. 2015, strain Ppe8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.