STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEJ10046.1Glycosyltransferase involved in cell wall bisynthesis. (366 aa)    
Predicted Functional Partners:
SEJ10080.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.928
SEJ10000.1
Glycosyltransferase, GT2 family.
 
    0.856
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.834
SEJ41934.1
Maltooligosyl trehalose hydrolase.
   
 0.834
SEJ09931.1
Hypothetical protein.
 
   
 0.810
SEJ09963.1
Polysaccharide transporter, PST family.
  
 
  0.791
SEJ36498.1
Hypothetical protein.
 
     0.747
SEJ41867.1
Trehalose synthase.
   
 0.746
SEJ20152.1
Hypothetical protein.
   
 
 0.710
SEK09853.1
Hypothetical protein.
   
 
 0.710
Your Current Organism:
Paraburkholderia tropica
NCBI taxonomy Id: 92647
Other names: ATCC BAA-831, Burkholderia tropica, Burkholderia tropica Reis et al. 2004, DSM 15359, LMG 22274, LMG:22274, P. tropica, Paraburkholderia tropica (Reis et al. 2004) Sawana et al. 2015, strain Ppe8
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